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public interface FastaValidatorCallback
Interface defining necessary FastaValidator-events. This interface needs to be implemented to react on events occuring during the validation/parsing process. It is passed to the validator-class as a parameter in the constructor. If no reaction is desired NULL can be passed.
Method Summary | |
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void |
commentline(java.lang.String commentline)
This method is invoked when a commentline occured. |
void |
eof()
This method is invoked at the end of file. |
void |
header(java.lang.String header)
This method is invoked when a headerline occured. |
void |
seqline(java.lang.String seqline)
This method is invoked when a sequenceline occured. |
Method Detail |
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void header(java.lang.String header) throws FastaHandlingException
header
- the parsed headerline (including ">")
FastaHandlingException
void commentline(java.lang.String commentline) throws FastaHandlingException
commentline
- the parsed commentline (including ";")
FastaHandlingException
void seqline(java.lang.String seqline) throws FastaHandlingException
seqline
- the parsed sequenceline
FastaHandlingException
void eof() throws FastaHandlingException
FastaHandlingException
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