General Help

Title Page

Goal of MAGIC Tool

Release Information

Installing MAGIC Tool

System Requirements

Vocabulary

Getting Started

Overview

Start a Project

Add Files to Project

Load TIFF Files

Load Gene List

Locate Spots

Distinguish Signal from Noise

Repeat For All Experimental Conditions

Manipulate Data

Add Gene Info

Explore Data

Filter Data

Calculate Correlation Coefficient

Cluster Genes

Automating Tasks

Closing Comments

Complete List of Options

Project

New Project

Load Project

Close Project

Add File

Add Directory

Remove File

Update Project

Project Properties

Exit

Build Expression File

Load Image Pair

Load Gene List

Load Saved Grid

Combine and Load Grid Files

Create/Edit Grid

Spot Flagging

Segmentation

Expression

Working Expression File

Merge Expression Files

Import Gene Info

Average Replicates

View/Edit Data

View/Edit Gene Info

Replace Names With Aliases

Dissimilarities

Manipulate Data

Explore

Cluster

Compute

Create Dendrogram with JTreeView

Display

Task

Credits