Nengo.ca

Serialized Form


Package ca.nengo

Class ca.nengo.NengoException extends java.lang.Exception implements Serializable

serialVersionUID: 1L


Package ca.nengo.config

Class ca.nengo.config.ConfigUtil.ConfigurationPane extends javax.swing.JScrollPane implements Serializable

serialVersionUID: 1L

Serialized Fields

myCellRenderer

ConfigurationTreeCellRenderer myCellRenderer

myTree

javax.swing.JTree myTree

Package ca.nengo.config.ui

Class ca.nengo.config.ui.ConfigurationTreeCellEditor extends javax.swing.DefaultCellEditor implements Serializable

serialVersionUID: 1L

Serialized Fields

myTree

javax.swing.JTree myTree

Class ca.nengo.config.ui.ConfigurationTreeCellRenderer extends javax.swing.tree.DefaultTreeCellRenderer implements Serializable

serialVersionUID: 1L

Class ca.nengo.config.ui.MatrixEditor extends javax.swing.JPanel implements Serializable

serialVersionUID: 1L

Serialized Fields

myMatrix

float[][] myMatrix

myTableModel

ca.nengo.config.ui.MatrixEditor.MatrixTableModel myTableModel

myRowHeaderModel

ca.nengo.config.ui.MatrixEditor.RowHeaderTableModel myRowHeaderModel

myTable

javax.swing.JTable myTable

myControlPanel

javax.swing.JPanel myControlPanel

Class ca.nengo.config.ui.NewConfigurableDialog extends javax.swing.JDialog implements Serializable

serialVersionUID: 1L

Serialized Fields

myResult

java.lang.Object myResult

myConfiguration

Configuration myConfiguration

myConfigurationTree

javax.swing.JTree myConfigurationTree

myPopupListener

ConfigurationTreePopupListener myPopupListener

myPreviousButton

javax.swing.JButton myPreviousButton

myNextButton

javax.swing.JButton myNextButton

myOKButton

javax.swing.JButton myOKButton

myConstructors

java.lang.reflect.Constructor<T>[] myConstructors

myConstructorIndex

int myConstructorIndex

Package ca.nengo.dynamics

Package ca.nengo.dynamics.impl

Class ca.nengo.dynamics.impl.AbstractDynamicalSystem extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

myState

float[] myState

Class ca.nengo.dynamics.impl.EulerIntegrator extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

h

float h

Class ca.nengo.dynamics.impl.LTISystem extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

A

float[][] A

B

float[][] B

C

float[][] C

D

float[][] D

x

float[] x

myOutputUnits

Units[] myOutputUnits

Class ca.nengo.dynamics.impl.RK45Integrator extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

myPow

double myPow

myTolerance

float myTolerance

Class ca.nengo.dynamics.impl.SimpleLTISystem extends LTISystem implements Serializable

serialVersionUID: 1L

Serialized Fields

A

float[] A

B

float[][] B

C

float[][] C

Package ca.nengo.math

Package ca.nengo.math.impl

Class ca.nengo.math.impl.AbstractFunction extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

myDim

int myDim

myCode

java.lang.String myCode

myName

java.lang.String myName

Class ca.nengo.math.impl.CompositeApproximator extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

myComponents

LinearApproximator[] myComponents

myDimensions

int[][] myDimensions

Class ca.nengo.math.impl.ConstantFunction extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

myDimension

int myDimension

myValue

float myValue

Class ca.nengo.math.impl.Convolution extends AbstractFunction implements Serializable

serialVersionUID: 1L

Serialized Fields

myOne

Function myOne

myTwo

Function myTwo

myStepSize

float myStepSize

myWindow

float myWindow

Class ca.nengo.math.impl.ExponentialPDF extends AbstractFunction implements Serializable

serialVersionUID: 1L

Serialized Fields

myTau

float myTau

Class ca.nengo.math.impl.FixedSignalFunction extends AbstractFunction implements Serializable

serialVersionUID: 1L

Serialized Fields

myDimension

int myDimension

mySignal

float[][] mySignal

myIndex

int myIndex

Class ca.nengo.math.impl.FourierFunction extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

myFrequencies

float[][] myFrequencies

myAmplitudes

float[] myAmplitudes

myPhases

float[][] myPhases

myFundamental

float myFundamental

myCutoff

float myCutoff

myRms

float myRms

mySeed

long mySeed

Class ca.nengo.math.impl.FunctionBasisImpl extends AbstractFunction implements Serializable

serialVersionUID: 1L

Serialized Fields

myFunctions

Function[] myFunctions

myCoefficients

float[] myCoefficients

Class ca.nengo.math.impl.GaussianPDF extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

myMean

float myMean

myVariance

float myVariance

mySD

float mySD

nextNormal

float nextNormal

nextAvailable

boolean nextAvailable

myPeak

float myPeak

myScalePeakWithVariance

boolean myScalePeakWithVariance

Class ca.nengo.math.impl.GradientDescentApproximator extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

myEvalPoints

float[][] myEvalPoints

myValues

float[][] myValues

myStartingCoefficients

float[] myStartingCoefficients

myConstraints

GradientDescentApproximator.Constraints myConstraints

myMaxIterations

int myMaxIterations

myRate

float myRate

myTolerance

float myTolerance

myIgnoreBias

boolean myIgnoreBias

Class ca.nengo.math.impl.GradientDescentApproximator.CoefficientsSameSign extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

mySignPositive

boolean mySignPositive

Class ca.nengo.math.impl.GradientDescentApproximator.Factory extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

myConstraints

GradientDescentApproximator.Constraints myConstraints

myIgnoreBiasFlag

boolean myIgnoreBiasFlag

Class ca.nengo.math.impl.IdentityFunction extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

myDimension

int myDimension

myIdentityDimension

int myIdentityDimension

Class ca.nengo.math.impl.IndependentDimensionApproximator extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

myApproximators

LinearApproximator[] myApproximators

myIndices

int[][] myIndices

myDimensions

int[] myDimensions

myEvalPoints

float[][] myEvalPoints

myValues

float[][] myValues

Class ca.nengo.math.impl.IndependentDimensionApproximator.Factory extends java.lang.Object implements Serializable

serialVersionUID: 1L

Class ca.nengo.math.impl.IndicatorPDF extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

myLow

float myLow

myHigh

float myHigh

myDifference

float myDifference

myVal

float myVal

Class ca.nengo.math.impl.InterpolatedFunction extends AbstractFunction implements Serializable

serialVersionUID: 1L

Serialized Fields

myX

float[] myX

myY

float[] myY

Class ca.nengo.math.impl.LinearFunction extends AbstractFunction implements Serializable

serialVersionUID: 1L

Serialized Fields

myMap

float[] myMap

myBias

float myBias

myRectified

boolean myRectified

Class ca.nengo.math.impl.NumericallyDifferentiableFunction extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

myFunction

Function myFunction

myDerivative

NumericallyDifferentiableFunction.NumericalDerivative myDerivative

Class ca.nengo.math.impl.NumericallyDifferentiableFunction.NumericalDerivative extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

myFunction

Function myFunction

myDerivativeDimension

int myDerivativeDimension

myDelta

float myDelta

Class ca.nengo.math.impl.PDFFunction extends AbstractFunction implements Serializable

serialVersionUID: 1L

Serialized Fields

myPDF

PDF myPDF

Class ca.nengo.math.impl.PiecewiseConstantFunction extends AbstractFunction implements Serializable

serialVersionUID: 1L

Serialized Fields

myDiscontinuities

float[] myDiscontinuities

myValues

float[] myValues

Class ca.nengo.math.impl.PoissonPDF extends AbstractFunction implements Serializable

serialVersionUID: 1L

Serialized Fields

myRate

float myRate

Class ca.nengo.math.impl.Polynomial extends AbstractFunction implements Serializable

serialVersionUID: 1L

Serialized Fields

myCoefficients

float[] myCoefficients

Class ca.nengo.math.impl.PostfixFunction extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

myExpressionList

java.util.List<E> myExpressionList

myExpression

java.lang.String myExpression
A human-readable string representation of the function


myDimension

int myDimension

Class ca.nengo.math.impl.SigmoidFunction extends AbstractFunction implements Serializable

serialVersionUID: 1L

Serialized Fields

myLow

float myLow

myHigh

float myHigh

myInflection

float myInflection

myMultiplier

float myMultiplier

myDerivative

Function myDerivative

Class ca.nengo.math.impl.SimpleFunctions.Acos extends AbstractFunction implements Serializable

serialVersionUID: 1L

Class ca.nengo.math.impl.SimpleFunctions.Asin extends AbstractFunction implements Serializable

serialVersionUID: 1L

Class ca.nengo.math.impl.SimpleFunctions.Atan extends AbstractFunction implements Serializable

serialVersionUID: 1L

Class ca.nengo.math.impl.SimpleFunctions.Cos extends AbstractFunction implements Serializable

serialVersionUID: 1L

Class ca.nengo.math.impl.SimpleFunctions.Exp extends AbstractFunction implements Serializable

serialVersionUID: 1L

Class ca.nengo.math.impl.SimpleFunctions.Fold extends AbstractFunction implements Serializable

serialVersionUID: 1L

Class ca.nengo.math.impl.SimpleFunctions.InverseNormal extends AbstractFunction implements Serializable

serialVersionUID: 1L

Class ca.nengo.math.impl.SimpleFunctions.Ln extends AbstractFunction implements Serializable

serialVersionUID: 1L

Class ca.nengo.math.impl.SimpleFunctions.Log10 extends AbstractFunction implements Serializable

serialVersionUID: 1L

Class ca.nengo.math.impl.SimpleFunctions.Log2 extends AbstractFunction implements Serializable

serialVersionUID: 1L

Class ca.nengo.math.impl.SimpleFunctions.Max extends AbstractFunction implements Serializable

serialVersionUID: 1L

Class ca.nengo.math.impl.SimpleFunctions.Min extends AbstractFunction implements Serializable

serialVersionUID: 1L

Class ca.nengo.math.impl.SimpleFunctions.Normal extends AbstractFunction implements Serializable

serialVersionUID: 1L

Class ca.nengo.math.impl.SimpleFunctions.Pow extends AbstractFunction implements Serializable

serialVersionUID: 1L

Class ca.nengo.math.impl.SimpleFunctions.Sin extends AbstractFunction implements Serializable

serialVersionUID: 1L

Class ca.nengo.math.impl.SimpleFunctions.Sqrt extends AbstractFunction implements Serializable

serialVersionUID: 1L

Class ca.nengo.math.impl.SimpleFunctions.Tan extends AbstractFunction implements Serializable

serialVersionUID: 1L

Class ca.nengo.math.impl.SineFunction extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

myOmega

float myOmega

myAmplitude

float myAmplitude

Class ca.nengo.math.impl.TimeSeriesFunction extends AbstractFunction implements Serializable

serialVersionUID: 1L

Serialized Fields

myDimension

int myDimension

myTimeSeries

TimeSeries myTimeSeries

Class ca.nengo.math.impl.WeightedCostApproximator extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

myEvalPoints

float[][] myEvalPoints

myValues

float[][] myValues

myNoisyValues

float[][] myNoisyValues

myCostFunction

Function myCostFunction

mySignalLength

int mySignalLength

myQuiet

boolean myQuiet

myGammaInverse

double[][] myGammaInverse

Class ca.nengo.math.impl.WeightedCostApproximator.Factory extends java.lang.Object implements Serializable

serialVersionUID: -3390244062379730498L

Serialized Fields

myNoise

float myNoise

myNSV

int myNSV

myQuiet

boolean myQuiet

Package ca.nengo.model

Class ca.nengo.model.SimulationException extends NengoException implements Serializable

serialVersionUID: 1L

Serialized Fields

myEnsembleName

java.lang.String myEnsembleName

Class ca.nengo.model.StructuralException extends NengoException implements Serializable

serialVersionUID: 1L


Package ca.nengo.model.impl

Class ca.nengo.model.impl.AbstractEnsemble extends java.lang.Object implements Serializable

serialVersionUID: -5498397418584843304L

Serialized Fields

myName

java.lang.String myName

myStateNames

java.util.Map<K,V> myStateNames

myMode

SimulationMode myMode

myCollectSpikesFlag

boolean myCollectSpikesFlag

myCollectSpikesRatio

int myCollectSpikesRatio

myDocumentation

java.lang.String myDocumentation

myNodes

Node[] myNodes

myOrigins

java.util.Map<K,V> myOrigins

myTerminations

java.util.Map<K,V> myTerminations

Class ca.nengo.model.impl.AbstractNode extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

myName

java.lang.String myName

myMode

SimulationMode myMode

myOrigins

java.util.Map<K,V> myOrigins

myTerminations

java.util.Map<K,V> myTerminations

myDocumentation

java.lang.String myDocumentation

Class ca.nengo.model.impl.BasicOrigin extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

myNode

Node myNode

myName

java.lang.String myName

myDimension

int myDimension

myUnits

Units myUnits

myValues

InstantaneousOutput myValues

myNoise

Noise myNoise

myNoises

Noise[] myNoises

myRequiredOnCPU

boolean myRequiredOnCPU

Class ca.nengo.model.impl.BasicTermination extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

myNode

Node myNode

myDynamics

DynamicalSystem myDynamics

myIntegrator

Integrator myIntegrator

myName

java.lang.String myName

myInput

InstantaneousOutput myInput

myOutput

TimeSeries myOutput

myModulatory

boolean myModulatory

Class ca.nengo.model.impl.EnsembleImpl extends AbstractEnsemble implements Serializable

serialVersionUID: 1L

Serialized Fields

myExpandableNodes

ExpandableNode[] myExpandableNodes

myExpandedTerminations

java.util.Map<K,V> myExpandedTerminations

Class ca.nengo.model.impl.EnsembleOrigin extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

myNode

Node myNode

myNodeOrigins

Origin[] myNodeOrigins

myName

java.lang.String myName

myRequiredOnCPU

boolean myRequiredOnCPU

Class ca.nengo.model.impl.EnsembleTermination extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

myNode

Node myNode

myName

java.lang.String myName

myNodeTerminations

Termination[] myNodeTerminations

Class ca.nengo.model.impl.FunctionInput extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

myName

java.lang.String myName

myFunctions

Function[] myFunctions

myUnits

Units myUnits

myTime

float myTime

myOrigin

BasicOrigin myOrigin

myDocumentation

java.lang.String myDocumentation

Class ca.nengo.model.impl.LinearExponentialTermination extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

myNode

Node myNode

myName

java.lang.String myName

myTauPSC

float myTauPSC

myModulatory

boolean myModulatory

myInitialWeights

float[] myInitialWeights

myWeights

float[] myWeights

myWeightProbabilities

float[] myWeightProbabilities

random

java.util.Random random

myCurrent

float myCurrent

myNetSpikeInput

float myNetSpikeInput

myNetRealInput

float myNetRealInput

myPreciseSpikeInputTimes

float[] myPreciseSpikeInputTimes

myIntegrationTime

float myIntegrationTime

myRawInput

InstantaneousOutput myRawInput

Class ca.nengo.model.impl.NetworkArrayImpl extends NetworkImpl implements Serializable

serialVersionUID: 1L

Serialized Fields

myNumNodes

int myNumNodes

myDimension

int myDimension

myNodeDimensions

int[] myNodeDimensions

myNodes

NEFEnsembleImpl[] myNodes

myOrigins

java.util.Map<K,V> myOrigins

myNeurons

int myNeurons

Class ca.nengo.model.impl.NetworkArrayImpl.ArrayOrigin extends BasicOrigin implements Serializable

serialVersionUID: 1L

Serialized Fields

myName

java.lang.String myName

myParent

NetworkArrayImpl myParent

myOrigins

DecodedOrigin[] myOrigins

myDimensions

int myDimensions

Class ca.nengo.model.impl.NetworkImpl extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

myNodeMap

java.util.Map<K,V> myNodeMap

myProjectionMap

java.util.Map<K,V> myProjectionMap

myName

java.lang.String myName

myMode

SimulationMode myMode

myModeFixed

boolean myModeFixed

mySimulator

Simulator mySimulator

myStepSize

float myStepSize

myProbeables

java.util.Map<K,V> myProbeables

myProbeableStates

java.util.Map<K,V> myProbeableStates

myExposedOrigins

java.util.Map<K,V> myExposedOrigins

myExposedTerminations

java.util.Map<K,V> myExposedTerminations

OrderedExposedOrigins

java.util.LinkedList<E> OrderedExposedOrigins

OrderedExposedTerminations

java.util.LinkedList<E> OrderedExposedTerminations

myDocumentation

java.lang.String myDocumentation

myMetaData

java.util.Map<K,V> myMetaData

myExposedOriginNames

java.util.Map<K,V> myExposedOriginNames

myExposedTerminationNames

java.util.Map<K,V> myExposedTerminationNames

myNumGPU

int myNumGPU

myNumJavaThreads

int myNumJavaThreads

myUseGPU

boolean myUseGPU

Class ca.nengo.model.impl.NetworkImpl.OriginWrapper extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

myNode

Node myNode

myWrapped

Origin myWrapped

myName

java.lang.String myName

Class ca.nengo.model.impl.NetworkImpl.TerminationWrapper extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

myNode

Node myNode

myWrapped

Termination myWrapped

myName

java.lang.String myName

Class ca.nengo.model.impl.NoiseFactory.NoiseImplFunction extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

myFunction

Function myFunction

Class ca.nengo.model.impl.NoiseFactory.NoiseImplNull extends java.lang.Object implements Serializable

serialVersionUID: 1L

Class ca.nengo.model.impl.NoiseFactory.NoiseImplPDF extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

myPeriod

float myPeriod

myPDF

PDF myPDF

myDynamics

DynamicalSystem myDynamics

myIntegrator

Integrator myIntegrator

myLastGenTime

float myLastGenTime

myLastDynamicsTime

float myLastDynamicsTime

myLastRawNoise

float[] myLastRawNoise

myCurrentRawNoise

float[] myCurrentRawNoise

myUnits

Units[] myUnits

myInitialState

float[] myInitialState

Class ca.nengo.model.impl.PassthroughNode extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

myName

java.lang.String myName

myDimension

int myDimension

myTerminations

java.util.Map<K,V> myTerminations

myOrigin

BasicOrigin myOrigin

myDocumentation

java.lang.String myDocumentation

Class ca.nengo.model.impl.PassthroughNode.PassthroughTermination extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

myNode

Node myNode

myName

java.lang.String myName

myDimension

int myDimension

myTransform

float[][] myTransform

myValues

InstantaneousOutput myValues

Class ca.nengo.model.impl.PreciseSpikeOutputImpl extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

myValues

boolean[] myValues

mySpikeTimes

float[] mySpikeTimes

myUnits

Units myUnits

myTime

float myTime

Class ca.nengo.model.impl.ProbeableOrigin extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

myNode

Node myNode

myProbeable

Probeable myProbeable

myStateVariable

java.lang.String myStateVariable

myDimension

int myDimension

myName

java.lang.String myName

myUnits

Units myUnits

myRequiredOnCPU

boolean myRequiredOnCPU

Class ca.nengo.model.impl.ProjectionImpl extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

myOrigin

Origin myOrigin

myTermination

Termination myTermination

myNetwork

Network myNetwork

myBiasIsEnabled

boolean myBiasIsEnabled

myInterneurons

NEFEnsemble myInterneurons

myBiasOrigin

BiasOrigin myBiasOrigin

myDirectBT

BiasTermination myDirectBT

myIndirectBT

BiasTermination myIndirectBT

myInterneuronTermination

DecodedTermination myInterneuronTermination

Class ca.nengo.model.impl.RealOutputImpl extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

myValues

float[] myValues

myUnits

Units myUnits

myTime

float myTime

Class ca.nengo.model.impl.SpikeOutputImpl extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

myValues

boolean[] myValues

myUnits

Units myUnits

myTime

float myTime

Package ca.nengo.model.muscle

Package ca.nengo.model.muscle.impl

Class ca.nengo.model.muscle.impl.CriticallyDampedMuscle extends SkeletalMuscleImpl implements Serializable

serialVersionUID: 1L

Class ca.nengo.model.muscle.impl.HillMuscle extends SkeletalMuscleImpl implements Serializable

serialVersionUID: 1L

Class ca.nengo.model.muscle.impl.HillMuscle.Dynamics extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

myTauEA

float myTauEA

myMaxIsometricForce

float myMaxIsometricForce

myCEForceLength

Function myCEForceLength

myCEForceVelocity

Function myCEForceVelocity

mySEForceLength

Function mySEForceLength

myRootFinder

RootFinder myRootFinder

myUnits

Units[] myUnits

myState

float[] myState

Class ca.nengo.model.muscle.impl.LinkSegmentModelImpl extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

myName

java.lang.String myName

myDynamics

DynamicalSystem myDynamics

myJointDefinitions

java.util.Map<K,V> myJointDefinitions

myMuscles

SkeletalMuscle[] myMuscles

myLengths

Function[] myLengths

myMomentArms

Function[] myMomentArms

myStates

java.util.Properties myStates

myTimeStep

float myTimeStep

myTime

float myTime

myDocumentation

java.lang.String myDocumentation

Class ca.nengo.model.muscle.impl.SkeletalMuscleImpl extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

myName

java.lang.String myName

myTermination

BasicTermination myTermination

myEADynamics

DynamicalSystem myEADynamics

myAFDynamics

DynamicalSystem myAFDynamics

myIntegrator

Integrator myIntegrator

myLength

float myLength

myDocumentation

java.lang.String myDocumentation

myActivationHistory

TimeSeries myActivationHistory

myForceHistory

TimeSeries myForceHistory

myLengthHistory

TimeSeries myLengthHistory

Package ca.nengo.model.nef

Package ca.nengo.model.nef.impl

Class ca.nengo.model.nef.impl.BiasOrigin extends DecodedOrigin implements Serializable

serialVersionUID: 1L

Serialized Fields

myInterneurons

NEFEnsemble myInterneurons

myConstantOutputs

float[][] myConstantOutputs

Class ca.nengo.model.nef.impl.BiasTermination extends DecodedTermination implements Serializable

serialVersionUID: 1L

Serialized Fields

myBiasEncoders

float[] myBiasEncoders

myBaseName

java.lang.String myBaseName

myIsEnabled

boolean myIsEnabled

Class ca.nengo.model.nef.impl.DecodableEnsembleImpl extends PlasticEnsembleImpl implements Serializable

serialVersionUID: 1L

Serialized Fields

myDecodedOrigins

java.util.Map<K,V> myDecodedOrigins

myDecodedTerminations

java.util.Map<K,V> myDecodedTerminations

myApproximatorFactory

ApproximatorFactory myApproximatorFactory

myApproximators

java.util.Map<K,V> myApproximators

myTime

float myTime

Class ca.nengo.model.nef.impl.DecodedOrigin extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

myNode

Node myNode

myName

java.lang.String myName

myNodes

Node[] myNodes

myNodeOrigin

java.lang.String myNodeOrigin

myFunctions

Function[] myFunctions

myDecoders

float[][] myDecoders

myMode

SimulationMode myMode

myOutput

RealOutput myOutput

myNoise

Noise myNoise

myNoises

Noise[] myNoises

mySTPDynamicsTemplate

DynamicalSystem mySTPDynamicsTemplate

mySTPDynamics

DynamicalSystem[] mySTPDynamics

myIntegrator

Integrator myIntegrator

mySTPHistory

float[] mySTPHistory

myTime

float myTime

myRequiredOnCPU

boolean myRequiredOnCPU

myExpressModel

ExpressModel myExpressModel

Class ca.nengo.model.nef.impl.DecodedTermination extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

myNode

Node myNode

myName

java.lang.String myName

myOutputDimension

int myOutputDimension

myTransform

float[][] myTransform

myDynamicsTemplate

LinearSystem myDynamicsTemplate

myDynamics

LinearSystem[] myDynamics

myIntegrator

Integrator myIntegrator

myNullUnits

Units[] myNullUnits

myInputValues

RealOutput myInputValues

myTime

float myTime

myOutputValues

float[] myOutputValues

myTauMutable

boolean myTauMutable

myScalingTermination

DecodedTermination myScalingTermination

myStaticBias

float[] myStaticBias

myTau

float myTau

myModulatory

boolean myModulatory

myInitialState

float[][] myInitialState

myValuesSet

boolean myValuesSet

Class ca.nengo.model.nef.impl.NEFEnsembleFactoryImpl extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

myApproximatorFactory

ApproximatorFactory myApproximatorFactory

myEncoderFactory

VectorGenerator myEncoderFactory

myEvalPointFactory

VectorGenerator myEvalPointFactory

myNodeFactory

NodeFactory myNodeFactory

Class ca.nengo.model.nef.impl.NEFEnsembleImpl extends DecodableEnsembleImpl implements Serializable

serialVersionUID: 1L

Serialized Fields

myDimension

int myDimension

myEncoders

float[][] myEncoders

myDecodingApproximators

java.util.Map<K,V> myDecodingApproximators

myReuseApproximators

boolean myReuseApproximators

myUnscaledEvalPoints

float[][] myUnscaledEvalPoints

myEvalPoints

float[][] myEvalPoints

myRadii

float[] myRadii

myInverseRadii

float[] myInverseRadii

myRadiiAreOne

boolean myRadiiAreOne

myDirectModeDynamics

DynamicalSystem myDirectModeDynamics

myDirectModeIntegrator

Integrator myDirectModeIntegrator

myModeFixed

boolean myModeFixed

myEnsembleFactory

NEFEnsembleFactory myEnsembleFactory

myUseGPU

boolean myUseGPU

Package ca.nengo.model.neuron

Package ca.nengo.model.neuron.impl

Class ca.nengo.model.neuron.impl.ALIFNeuronFactory extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

myMaxRate

PDF myMaxRate

myIntercept

PDF myIntercept

myIncN

PDF myIncN

myTauRef

float myTauRef

myTauRC

float myTauRC

myTauN

float myTauN

Class ca.nengo.model.neuron.impl.ALIFSpikeGenerator extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

myMode

SimulationMode myMode

myTauRef

float myTauRef

myTauRC

float myTauRC

myTauN

float myTauN

myIncN

float myIncN

myInitialVoltage

float myInitialVoltage

myV

float myV

myN

float myN

myTimeSinceLastSpike

float myTimeSinceLastSpike

myTime

float[] myTime

myVHistory

float[] myVHistory

myNHistory

float[] myNHistory

myRateHistory

float[] myRateHistory

Class ca.nengo.model.neuron.impl.ALIFSpikeGenerator.Factory extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

myTauRef

PDF myTauRef

myTauRC

PDF myTauRC

myTauN

PDF myTauN

myIncN

PDF myIncN

Class ca.nengo.model.neuron.impl.DynamicalSystemSpikeGenerator extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

myDynamics

DynamicalSystem myDynamics

myIntegrator

Integrator myIntegrator

myDynamicsOutput

TimeSeries myDynamicsOutput

myVDim

int myVDim

mySpikeThreshold

float mySpikeThreshold

myMinIntraSpikeTime

float myMinIntraSpikeTime

myLastSpikeTime

float myLastSpikeTime

myMode

SimulationMode myMode

mySupportedModes

SimulationMode[] mySupportedModes

myConstantRateFunction

Function myConstantRateFunction

myConstantRateFunctionOK

boolean myConstantRateFunctionOK

myCurrents

float[] myCurrents

myTransientTime

float myTransientTime

Class ca.nengo.model.neuron.impl.ExpandableSpikingNeuron extends SpikingNeuron implements Serializable

serialVersionUID: 1L

Serialized Fields

mySynapticIntegrator

ExpandableSynapticIntegrator mySynapticIntegrator

Class ca.nengo.model.neuron.impl.GruberNeuronFactory extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

myScalePDF

PDF myScalePDF

myBiasPDF

PDF myBiasPDF

Class ca.nengo.model.neuron.impl.GruberNeuronFactory.GruberNeuron extends ExpandableSpikingNeuron implements Serializable

serialVersionUID: 1L

Serialized Fields

myDopamineTermination

LinearExponentialTermination myDopamineTermination

mySpikeGenerator

GruberSpikeGenerator mySpikeGenerator

Class ca.nengo.model.neuron.impl.GruberSpikeGenerator extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

myDynamics

GruberSpikeGenerator.GruberDynamics myDynamics

myIntegrator

Integrator myIntegrator

myDopamine

float myDopamine

myLastSpikeTime

float myLastSpikeTime

myMembranePotentialHistory

TimeSeries myMembranePotentialHistory

mySteadyStateVmFunction

Function mySteadyStateVmFunction

myMode

SimulationMode myMode

mySupportedModes

SimulationMode[] mySupportedModes

Class ca.nengo.model.neuron.impl.GruberSpikeGenerator.GruberDynamics extends AbstractDynamicalSystem implements Serializable

serialVersionUID: 1L

Class ca.nengo.model.neuron.impl.HodgkinHuxleySpikeGenerator extends DynamicalSystemSpikeGenerator implements Serializable

serialVersionUID: 1L

Class ca.nengo.model.neuron.impl.HodgkinHuxleySpikeGenerator.HodgkinHuxleyNeuronFactory extends java.lang.Object implements Serializable

serialVersionUID: 1L

Class ca.nengo.model.neuron.impl.HodgkinHuxleySpikeGenerator.HodgkinHuxleySystem extends AbstractDynamicalSystem implements Serializable

serialVersionUID: 1L

Class ca.nengo.model.neuron.impl.IzhikevichSpikeGenerator extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

myA

double myA

myB

double myB

myC

double myC

myD

double myD

myInitialVoltage

double myInitialVoltage

myPreset

IzhikevichSpikeGenerator.Preset myPreset

myVoltage

double myVoltage

myRecovery

double myRecovery

myTime

float[] myTime

myVoltageHistory

float[] myVoltageHistory

myRecoveryHistory

float[] myRecoveryHistory

mySpikeRate

float mySpikeRate

myMode

SimulationMode myMode

Class ca.nengo.model.neuron.impl.LIFNeuronFactory extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

myTauRC

float myTauRC

myTauRef

float myTauRef

myMaxRate

PDF myMaxRate

myIntercept

PDF myIntercept

Class ca.nengo.model.neuron.impl.LIFSpikeGenerator extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

myMaxTimeStep

float myMaxTimeStep

myTauRC

float myTauRC

myTauRef

float myTauRef

myInitialVoltage

float myInitialVoltage

myVoltage

float myVoltage

myTimeSinceLastSpike

float myTimeSinceLastSpike

myPreviousVoltage

float myPreviousVoltage

myTime

float[] myTime

myVoltageHistory

float[] myVoltageHistory

myMode

SimulationMode myMode

mySupportedModes

SimulationMode[] mySupportedModes

Class ca.nengo.model.neuron.impl.LIFSpikeGenerator.Factory extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

myTauRC

PDF myTauRC

myTauRef

PDF myTauRef

Class ca.nengo.model.neuron.impl.LinearSynapticIntegrator extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

myNode

Node myNode

myMaxTimeStep

float myMaxTimeStep

myCurrentUnits

Units myCurrentUnits

myTerminations

java.util.Map<K,V> myTerminations

Class ca.nengo.model.neuron.impl.LinearSynapticIntegrator.Factory extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

myUnits

Units myUnits

myMaxTimeStep

float myMaxTimeStep

Class ca.nengo.model.neuron.impl.PoissonSpikeGenerator extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

myRateFunction

Function myRateFunction

myMode

SimulationMode myMode

Class ca.nengo.model.neuron.impl.PoissonSpikeGenerator.LinearFactory extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

myMaxRate

PDF myMaxRate

myIntercept

PDF myIntercept

myRectified

boolean myRectified

Class ca.nengo.model.neuron.impl.PoissonSpikeGenerator.LinearNeuronFactory extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

mySpikeGeneratorFactory

PoissonSpikeGenerator.LinearFactory mySpikeGeneratorFactory

Class ca.nengo.model.neuron.impl.PoissonSpikeGenerator.SigmoidFactory extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

mySlope

PDF mySlope

myInflection

PDF myInflection

myMaxRate

PDF myMaxRate

Class ca.nengo.model.neuron.impl.PoissonSpikeGenerator.SigmoidNeuronFactory extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

mySigmoidFactory

PoissonSpikeGenerator.SigmoidFactory mySigmoidFactory

Class ca.nengo.model.neuron.impl.PyramidalNetwork extends NetworkImpl implements Serializable

serialVersionUID: 1L

Serialized Fields

oneDimTerminations

boolean oneDimTerminations

dim

int dim

somaDim

int somaDim

size

int size

subUnitNum

int subUnitNum

somaEncoders

float[][] somaEncoders

Dendrites

NEFEnsemble[] Dendrites

transfer

NEFEnsemble transfer

soma

NEFEnsemble soma

myRange

float[][] myRange

myRadii

float[] myRadii

myDendriteCount

IndicatorPDF myDendriteCount

mySubDifference

float mySubDifference

interpreter

DefaultFunctionInterpreter interpreter

ranges

int ranges

LIFDendrites

boolean LIFDendrites

spikingLIFDendrites

boolean spikingLIFDendrites

myName

java.lang.String myName

myDendriteFunction

java.lang.String myDendriteFunction

myConnectedOrigin

java.lang.String myConnectedOrigin

Class ca.nengo.model.neuron.impl.PyramidalNetwork.PoiraziDendriteFactory extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

pf

RateFunctionSpikeGenerator.PoiraziDendriteSigmoidFactory pf

r

java.util.Random r

range

int range

Class ca.nengo.model.neuron.impl.RateFunctionSpikeGenerator extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

myRateFunction

Function myRateFunction

myMode

SimulationMode myMode

myVoltage

float myVoltage

smooth

boolean smooth

Class ca.nengo.model.neuron.impl.RateFunctionSpikeGenerator.PoiraziDendriteSigmoid extends AbstractFunction implements Serializable

serialVersionUID: 1L

Class ca.nengo.model.neuron.impl.RateFunctionSpikeGenerator.PoiraziDendriteSigmoidFactory extends java.lang.Object implements Serializable

serialVersionUID: 1L

Class ca.nengo.model.neuron.impl.RateFunctionSpikeGenerator.PoiraziSomaSigmoid extends AbstractFunction implements Serializable

serialVersionUID: 1L

Class ca.nengo.model.neuron.impl.SpikeGeneratorOrigin extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

myName

java.lang.String myName

myNode

Node myNode

myGenerator

SpikeGenerator myGenerator

myOutput

InstantaneousOutput myOutput

myRequiredOnCPU

boolean myRequiredOnCPU

Class ca.nengo.model.neuron.impl.SpikingNeuron extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

myIntegrator

SynapticIntegrator myIntegrator

myGenerator

SpikeGenerator myGenerator

mySpikeOrigin

SpikeGeneratorOrigin mySpikeOrigin

myCurrentOrigin

BasicOrigin myCurrentOrigin

myUnscaledCurrent

float myUnscaledCurrent

myCurrent

TimeSeries1D myCurrent

myName

java.lang.String myName

myScale

float myScale

myBias

float myBias

myRadialInput

float myRadialInput

myDocumentation

java.lang.String myDocumentation

myNoise

Noise myNoise

Class ca.nengo.model.neuron.impl.SpikingNeuronFactory extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

myIntegratorFactory

SynapticIntegratorFactory myIntegratorFactory

myGeneratorFactory

SpikeGeneratorFactory myGeneratorFactory

myScale

PDF myScale

myBias

PDF myBias

Package ca.nengo.model.plasticity

Package ca.nengo.model.plasticity.impl

Class ca.nengo.model.plasticity.impl.ModulatedPlasticEnsembleTermination extends PlasticEnsembleTermination implements Serializable

serialVersionUID: 1L

Serialized Fields

myModTermName

java.lang.String myModTermName

myModInput

float[] myModInput

Class ca.nengo.model.plasticity.impl.PESTermination extends ModulatedPlasticEnsembleTermination implements Serializable

serialVersionUID: 1L

Serialized Fields

myLastTime

float myLastTime

myFilteredInput

float[] myFilteredInput

myGain

float[] myGain

myEncoders

float[][] myEncoders

myOja

boolean myOja

Class ca.nengo.model.plasticity.impl.PlasticEnsembleImpl extends EnsembleImpl implements Serializable

serialVersionUID: 1L

Serialized Fields

myPlasticityInterval

float myPlasticityInterval

myLastPlasticityTime

float myLastPlasticityTime

myLearning

boolean myLearning

myPlasticEnsembleTerminations

java.util.Map<K,V> myPlasticEnsembleTerminations

myTasks

java.util.ArrayList<E> myTasks

Class ca.nengo.model.plasticity.impl.PlasticEnsembleTermination extends EnsembleTermination implements Serializable

serialVersionUID: 1L

Serialized Fields

myLearningRate

float myLearningRate

myLearning

boolean myLearning

myOriginName

java.lang.String myOriginName

myOutput

float[] myOutput

Class ca.nengo.model.plasticity.impl.PreLearnTermination extends ModulatedPlasticEnsembleTermination implements Serializable

serialVersionUID: 1L

Serialized Fields

myLastTime

float myLastTime

myInSpiking

boolean[] myInSpiking

myGain

float[] myGain

myEncoders

float[][] myEncoders

Class ca.nengo.model.plasticity.impl.STDPTermination extends PlasticEnsembleTermination implements Serializable

serialVersionUID: 1L

Serialized Fields

myLastTime

float myLastTime

myPreSpikeHistory

float[][] myPreSpikeHistory

myPostSpikeHistory

float[][] myPostSpikeHistory

myPreSpiking

boolean[] myPreSpiking

myPostSpiking

boolean[] myPostSpiking

myPostTrace1

float[] myPostTrace1

myPostTrace2

float[] myPostTrace2

myPreTrace1

float[] myPreTrace1

myPreTrace2

float[] myPreTrace2

myA2Minus

float myA2Minus

myA3Minus

float myA3Minus

myTauMinus

float myTauMinus

myTauX

float myTauX

myA2Plus

float myA2Plus

myA3Plus

float myA3Plus

myTauPlus

float myTauPlus

myTauY

float myTauY

Package ca.nengo.sim.impl

Class ca.nengo.sim.impl.LocalSimulator extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

myProjections

Projection[] myProjections

myNodes

Node[] myNodes

myTasks

ThreadTask[] myTasks

myProbeTasks

java.util.List<E> myProbeTasks

myNodeMap

java.util.Map<K,V> myNodeMap

myProbes

java.util.List<E> myProbes

myNetwork

Network myNetwork

myDisplayProgress

boolean myDisplayProgress

mySimulatorListeners

java.util.Collection<E> mySimulatorListeners
Collection of Simulator


Package ca.nengo.util

Class ca.nengo.util.ScriptGenException extends NengoException implements Serializable

serialVersionUID: 1L


Package ca.nengo.util.impl

Class ca.nengo.util.impl.FixedVectorGenerator extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

myVectors

float[][] myVectors

Class ca.nengo.util.impl.LinearInterpolatorND extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

mySeries

TimeSeries mySeries

myFinder

IndexFinder myFinder

myTimes

float[] myTimes

Class ca.nengo.util.impl.ProbeImpl extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

myTarget

Probeable myTarget

myStateName

java.lang.String myStateName

myRecord

boolean myRecord

myTimes

float[] myTimes

myValues

java.util.List<E> myValues

myUnits

Units[] myUnits

mySamplingPeriod

float mySamplingPeriod

myLastSampleTime

float myLastSampleTime

myEnsembleName

java.lang.String myEnsembleName

myProbeTask

ProbeTask myProbeTask

Class ca.nengo.util.impl.RandomHypersphereVG extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

mySurface

boolean mySurface

myRadius

float myRadius

myAxisClusterFactor

float myAxisClusterFactor

myAllOnAxes

boolean myAllOnAxes

myAxisRatio

float myAxisRatio

Class ca.nengo.util.impl.Rectifier extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

myVG

VectorGenerator myVG

myPositiveFlag

boolean myPositiveFlag

Class ca.nengo.util.impl.SpikePatternImpl extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

myIndices

int[] myIndices

mySpikeTimes

float[][] mySpikeTimes

Class ca.nengo.util.impl.TimeSeries1DImpl extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

myTimes

float[] myTimes

myValues

float[] myValues

myUnits

Units myUnits

myLabel

java.lang.String myLabel

myName

java.lang.String myName

Class ca.nengo.util.impl.TimeSeriesImpl extends java.lang.Object implements Serializable

serialVersionUID: 1L

Serialized Fields

myTimes

float[] myTimes

myValues

float[][] myValues

myUnits

Units[] myUnits

myLabels

java.lang.String[] myLabels

myName

java.lang.String myName


Nengo.ca