kea.programs.pintail.Constants |
public static final float |
CV_UPPER_LIMIT |
20.0f |
public static final int |
DEFAULT_STEP_SIZE |
25 |
public static final int |
DEFAULT_WINDOW_SIZE |
300 |
public static final java.lang.String |
ECOLI |
"AAATTGAAGAGTTTGATCATGGCTCAGATTGAACGCTGGCGGCAGGCCTAACACATGCAAGTCGAACGGTAACAGGAAGAAGCTTGCTTCTTTGCTGACGAGTGGCGGACGGGTGAGTAATGTCTGGGAAACTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGACCTTCGGGCCTCTTGCCATCGGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGCAAGCCTGATGCAGCCATGCCGCGTGTATGAAGAAGGCCTTCGGGTTGTAAAGTACTTTCAGCGGGGAGGAAGGGAGTAAAGTTAATACCTTTGCTCATTGACGTTACCCGCAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCACGCAGGCGGTTTGTTAAGTCAGATGTGAAATCCCCGGGCTCAACCTGGGAACTGCATCTGATACTGGCAAGCTTGAGTCTCGTAGAGGGGGGTAGAATTCCAGGTGTAGCGGTGAAATGCGTAGAGATCTGGAGGAATACCGGTGGCGAAGGCGGCCCCCTGGACGAAGACTGACGCTCAGGTGCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGTCGACTTGGAGGTTGTGCCCTTGAGGCGTGGCTTCCGGAGCTAACGCGTTAAGTCGACCGCCTGGGGAGTACGGCCGCAAGGTTAAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGGTCTTGACATCCACAGAACTTTCCAGAGATGGATTGGTGCCTTCGGGAACTGTGAGACAGGTGCTGCATGGCTGTCGTCAGCTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCTTTTGTTGCCAGCGGTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGACCAGGGCTACACACGTGCTACAATGGCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTGGATCAGAATGCCACGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCATGGGAGTGGGTTGCAAAAGAAGTAGGTAGCTTAACCTTCGGGAGGGCGCTTACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATCACCTCCTTA" |
public static final java.lang.String |
ECOLI_LABEL |
"ECOLI" |
public static final int |
ERROR_BAR_SIZE |
5 |
public static final int |
ERROR_Y_AXIS_END |
50 |
public static final int |
ERROR_Y_AXIS_START |
-50 |
public static final java.lang.String |
FIRST_SEQUENCE_NAME |
"query" |
public static final java.lang.String |
GREATER_THAN |
">" |
public static final double |
HIGH_MEAN |
15.0 |
public static final java.lang.String |
HTML_END |
"</font>" |
public static final java.lang.String |
HTML_START |
"<font style=\'font-family: helvetica,arial,sans-serif;\' size=\'-1\'>" |
public static final java.lang.String |
LESS_THAN |
"<" |
public static final double |
LOW_MEAN |
0.75 |
public static final java.lang.String |
MAC_OSX_CLUSTAL_PATH |
"bin/MacOSX/clustalw" |
public static final int |
MAX_STEP_SIZE |
500 |
public static final int |
MAX_WINDOW_SIZE |
500 |
public static final int |
MIN_STEP_SIZE |
1 |
public static final int |
MIN_WINDOW_SIZE |
1 |
public static final double |
NULL_VALUE |
-1.0 |
public static final double |
OBSERVED_SCORES_MEAN_CUT_OFF |
10.0 |
public static final float |
RC_LOWER_LIMIT |
-0.017999999225139618f |
public static final float |
RC_UPPER_LIMIT |
0.0010000000474974513f |
public static final float |
SD_UPPER_LIMIT |
4.75f |
public static final java.lang.String |
SECOND_SEQUENCE_NAME |
"subject" |
public static final int |
STEP_SIZE_USED_TO_CALCULATE_MODEL |
25 |
public static final double |
TOO_HIGH_MEAN_FOR_ACCURATE_CONCLUSION |
35.0 |
public static final double |
UNUSUALLY_HIGH_MEAN |
50.0 |
public static final int |
UNUSUALLY_LARGE_SEQUENCE |
1800 |
public static final java.lang.String |
WIN_CLUSTAL_PATH |
"bin/Win/clustalw.exe" |
public static final java.lang.String |
WIN_XP_CLUSTAL_PATH |
"bin/WinXP/clustalw.exe" |
public static final int |
WINDOW_SIZE_USED_TO_CALCULATE_MODEL |
300 |
public static final int |
X_AXIS_END |
1500 |
public static final int |
X_AXIS_START |
0 |
public static final int |
Y_AXIS_END |
50 |
public static final int |
Y_AXIS_START |
0 |