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java.lang.Objectkea.programs.jPrimrose.PrimroseOligoDatabase
public class PrimroseOligoDatabase
Stores OligoCollection objects.
Constructor Summary | |
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PrimroseOligoDatabase()
Creates a new instance of PrimroseOligoDatabase . |
Method Summary | |
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void |
addOligoCollection(kea.database.OligoCollection oligoCollection)
Adds an OligoCollection object to database. |
int |
getNumberOfCollections()
Returns number of OligoCollections in database. |
int |
getNumberOfOligos(int index)
Returns number of Oligo objects within a specified Oligo collection. |
kea.database.OligoCollection |
getOligoCollection(int index)
Returns OligoCollection object corresponding to index number. |
PrimroseOligo[] |
getOligos()
Returns an array of all Oligo objects stored in database. |
int |
getTotalNumberOfOligos()
Returns total number of oligo objects in database (the sum of all OligoCollection sizes). |
Methods inherited from class java.lang.Object |
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clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
Constructor Detail |
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public PrimroseOligoDatabase()
PrimroseOligoDatabase
.
Method Detail |
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public void addOligoCollection(kea.database.OligoCollection oligoCollection)
oligoCollection
- OligoCollection object to add.public kea.database.OligoCollection getOligoCollection(int index)
index
- Index number of OligoCollection object.
public PrimroseOligo[] getOligos()
public int getNumberOfCollections()
public int getTotalNumberOfOligos()
public int getNumberOfOligos(int index)
index
- Index number of oligo collection to check.
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