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java.lang.Objectjava.util.Observable
toxTree.tree.AbstractRule
toxTree.qsar.LinearDiscriminantRule
mutant.rules.RuleDACancerogenicityAromaticAmines
public class RuleDACancerogenicityAromaticAmines
Field Summary |
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Fields inherited from class toxTree.qsar.LinearDiscriminantRule |
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dictionary, model, threshold |
Fields inherited from class toxTree.tree.AbstractRule |
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changes, editable, ERR_STRUCTURENOTPREPROCESSED, examples, explanation, id, logger, MSG_NO, MSG_YES, no, residueIDHidden, title |
Fields inherited from interface toxTree.core.XMLSerializable |
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xmltag_CATEGORIES, xmltag_CATEGORY, xmltag_CATEGORYTHRESHOLD, xmltag_CLASS, xmltag_EXPLANATION, xmltag_ID, xmltag_METHOD, xmltag_METHODPARAMETER, xmltag_METHODS, xmltag_NAME, xmltag_RULE, xmltag_RULEEXAMPLE, xmltag_RULES, xmltag_TREEROOT |
Constructor Summary | |
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RuleDACancerogenicityAromaticAmines()
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Method Summary | |
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protected boolean |
compare(double value,
double threshold)
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static LinearQSARModel |
createCancerogenicityAromaticAminesModel()
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protected DRuleException |
createException(ambit2.base.exceptions.QSARModelException x)
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java.lang.String |
getImplementationDetails()
Thus, if calculated w >29.08, then the substance should be carcinogen if calculated w< 29.08, then the substance should be noncarcinogen |
Methods inherited from class toxTree.qsar.LinearDiscriminantRule |
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getModel, getSelector, getThreshold, hint, isCalculated, isImplemented, setCalculated, setModel, setThreshold, verifyRule |
Methods inherited from class toxTree.tree.AbstractRule |
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addPropertyChangeListener, clearFlags, clone, createRule, equals, fromXML, getEditor, getExampleMolecule, getExamples, getExplanation, getID, getNum, getTitle, hideResiduesID, isEditable, isResidueIDHidden, log, log, log, makeMolecule, removePropertyChangeListener, setEditable, setExampleMolecule, setExamples, setExplanation, setID, setNum, setTitle, toShallowXML, toString, toXML |
Methods inherited from class java.util.Observable |
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addObserver, clearChanged, countObservers, deleteObserver, deleteObservers, hasChanged, notifyObservers, notifyObservers, setChanged |
Methods inherited from class java.lang.Object |
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finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait |
Constructor Detail |
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public RuleDACancerogenicityAromaticAmines()
Method Detail |
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public static LinearQSARModel createCancerogenicityAromaticAminesModel()
protected boolean compare(double value, double threshold)
compare
in class LinearDiscriminantRule
public java.lang.String getImplementationDetails()
getImplementationDetails
in interface IImplementationDetails
getImplementationDetails
in class LinearDiscriminantRule
protected DRuleException createException(ambit2.base.exceptions.QSARModelException x)
createException
in class LinearDiscriminantRule
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