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java.lang.Objectjava.util.Observable
toxTree.tree.AbstractRule
toxTree.tree.rules.RuleElements
verhaar.rules.helper.RuleElementsCounter
verhaar.rules.Rule11
public class Rule11
Does not contain I.
Field Summary |
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Fields inherited from class verhaar.rules.helper.RuleElementsCounter |
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alertsCounter |
Fields inherited from class toxTree.tree.rules.RuleElements |
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comparison, elements, mode, modeAllSpecifiedElements, modeAnySpecifiedElements, modeOnlySpecifiedElements |
Fields inherited from class toxTree.tree.AbstractRule |
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changes, editable, ERR_STRUCTURENOTPREPROCESSED, examples, explanation, id, logger, MSG_NO, MSG_YES, no, residueIDHidden, title |
Fields inherited from interface toxTree.core.XMLSerializable |
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xmltag_CATEGORIES, xmltag_CATEGORY, xmltag_CATEGORYTHRESHOLD, xmltag_CLASS, xmltag_EXPLANATION, xmltag_ID, xmltag_METHOD, xmltag_METHODPARAMETER, xmltag_METHODS, xmltag_NAME, xmltag_RULE, xmltag_RULEEXAMPLE, xmltag_RULES, xmltag_TREEROOT |
Constructor Summary | |
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Rule11()
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Method Summary | |
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void |
select(org.openscience.cdk.interfaces.IAtomContainer mol,
org.openscience.cdk.interfaces.IAtomContainer selected)
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boolean |
verifyRule(org.openscience.cdk.interfaces.IAtomContainer mol)
This is the core of a IDecisionRule behaviour. |
Methods inherited from class verhaar.rules.helper.RuleElementsCounter |
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getImplementationDetails, incrementCounter |
Methods inherited from class toxTree.tree.rules.RuleElements |
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addElement, contains, equals, getElements, gethalogens, getMode, getSelector, getTitle, hasOnlySpecifiedElements, isImplemented, removeElement, setComparisonMode, setElements, setHalogens, setHalogens, setMode, verifyRule |
Methods inherited from class toxTree.tree.AbstractRule |
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addPropertyChangeListener, clearFlags, clone, createRule, fromXML, getEditor, getExampleMolecule, getExamples, getExplanation, getID, getNum, hideResiduesID, isEditable, isResidueIDHidden, log, log, log, makeMolecule, removePropertyChangeListener, setEditable, setExampleMolecule, setExamples, setExplanation, setID, setNum, setTitle, toShallowXML, toString, toXML |
Methods inherited from class java.util.Observable |
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addObserver, clearChanged, countObservers, deleteObserver, deleteObservers, hasChanged, notifyObservers, notifyObservers, setChanged |
Methods inherited from class java.lang.Object |
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finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait |
Constructor Detail |
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public Rule11()
Method Detail |
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public boolean verifyRule(org.openscience.cdk.interfaces.IAtomContainer mol) throws DecisionMethodException
IDecisionRule
IDecisionRule
behaviour. The method returns true
if the answer of the rule is YES for the analyzed molecule org.openscience.cdk.interfaces.AtomContainer
and FALSE
if the answer of the rule is NO for the analyzed molecule org.openscience.cdk.interfaces.AtomContainer
??
verifyRule
in interface IDecisionRule
verifyRule
in class RuleElementsCounter
mol
- org.openscience.cdk.interfaces.AtomContainer
DecisionMethodException
public void select(org.openscience.cdk.interfaces.IAtomContainer mol, org.openscience.cdk.interfaces.IAtomContainer selected)
select
in class RuleElements
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