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java.lang.Objectjava.util.Observable
toxTree.tree.AbstractRule
com.molecularnetworks.start.rules.RuleTwoOrMoreRings
public class RuleTwoOrMoreRings
Biodegradation rule for chemicals with two or more rings.
Field Summary |
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Fields inherited from class toxTree.tree.AbstractRule |
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changes, editable, ERR_STRUCTURENOTPREPROCESSED, examples, explanation, id, logger, MSG_NO, MSG_YES, no, residueIDHidden, title |
Fields inherited from interface toxTree.core.XMLSerializable |
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xmltag_CATEGORIES, xmltag_CATEGORY, xmltag_CATEGORYTHRESHOLD, xmltag_CLASS, xmltag_EXPLANATION, xmltag_ID, xmltag_METHOD, xmltag_METHODPARAMETER, xmltag_METHODS, xmltag_NAME, xmltag_RULE, xmltag_RULEEXAMPLE, xmltag_RULES, xmltag_TREEROOT |
Constructor Summary | |
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RuleTwoOrMoreRings()
Default constructor |
Method Summary | |
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boolean |
isImplemented()
Overrides the default behaviour. |
boolean |
verifyRule(org.openscience.cdk.interfaces.IAtomContainer mol)
Overrides the default IDecisionRule behaviour. |
Methods inherited from class toxTree.tree.AbstractRule |
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addPropertyChangeListener, clearFlags, clone, createRule, equals, fromXML, getEditor, getExampleMolecule, getExamples, getExplanation, getID, getNum, getSelector, getTitle, hideResiduesID, isEditable, isResidueIDHidden, log, log, log, makeMolecule, removePropertyChangeListener, setEditable, setExampleMolecule, setExamples, setExplanation, setID, setNum, setTitle, toShallowXML, toString, toXML |
Methods inherited from class java.util.Observable |
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addObserver, clearChanged, countObservers, deleteObserver, deleteObservers, hasChanged, notifyObservers, notifyObservers, setChanged |
Methods inherited from class java.lang.Object |
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finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait |
Constructor Detail |
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public RuleTwoOrMoreRings()
Method Detail |
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public boolean isImplemented()
isImplemented
in interface IDecisionRule
isImplemented
in class AbstractRule
public boolean verifyRule(org.openscience.cdk.interfaces.IAtomContainer mol) throws DecisionMethodException
IDecisionRule
behaviour.
Returns TRUE, if the answer of the rule is YES for the analyzed
molecule org.openscience.cdk.interfaces.AtomContainer
Returns FALSE, if the answer of the rule is NO for the analyzed
molecule org.openscience.cdk.interfaces.AtomContainer
mol
- org.openscience.cdk.interfaces.AtomContainer
{@link
- DecisionMethodException}
DecisionMethodException
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