toxtree.data
Class ToxTreeModule

java.lang.Object
  extended by java.util.Observable
      extended by toxtree.data.DataModule
          extended by toxtree.data.DecisionMethodsDataModule
              extended by toxtree.data.ToxTreeModule
All Implemented Interfaces:
java.io.Serializable, java.util.Observer

public class ToxTreeModule
extends DecisionMethodsDataModule

Contains data essential for ToxTreeApp application

Also contains some UI frames :

Author:
Nina Jeliazkova
Modified 2005-8-1
See Also:
Serialized Form

Field Summary
protected  MetabolyteRecycler listener
           
 
Fields inherited from class toxtree.data.DecisionMethodsDataModule
editor, methods, rules, treeResult
 
Fields inherited from class toxtree.data.DataModule
batch, dataContainer, jcpDialog, jcpModel, logger, useDatabase
 
Constructor Summary
ToxTreeModule(javax.swing.JFrame frame, java.io.File inputFile, DecisionMethodsList methods)
           
 
Method Summary
 void batch(BatchProcessing bp)
           
protected  DataContainer createDataContainer(java.io.File inputFile)
           
 ActionList getActions()
           
 void setRules(IDecisionMethod rules)
           
 java.lang.String showMetabolites(RuleResult ruleResult)
           
 void update(java.util.Observable o, java.lang.Object arg)
           
 void viewMethod(boolean editable)
           
 
Methods inherited from class toxtree.data.DecisionMethodsDataModule
addResultPropertyChangeListener, addRulesPropertyChangeListener, classify, classifyAll, clearFilters, clearResults, explain, getMethods, getRules, getSelectedRules, getTreeResult, gotoRecord, lookup, selectFilter, setMethods, viewMethod, viewMethod
 
Methods inherited from class toxtree.data.DataModule
editMolecule, getDataContainer, showMetabolites
 
Methods inherited from class java.util.Observable
addObserver, clearChanged, countObservers, deleteObserver, deleteObservers, hasChanged, notifyObservers, notifyObservers, setChanged
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Field Detail

listener

protected MetabolyteRecycler listener
Constructor Detail

ToxTreeModule

public ToxTreeModule(javax.swing.JFrame frame,
                     java.io.File inputFile,
                     DecisionMethodsList methods)
Method Detail

createDataContainer

protected DataContainer createDataContainer(java.io.File inputFile)
Overrides:
createDataContainer in class DecisionMethodsDataModule

update

public void update(java.util.Observable o,
                   java.lang.Object arg)
Specified by:
update in interface java.util.Observer
Overrides:
update in class DecisionMethodsDataModule

batch

public void batch(BatchProcessing bp)
Overrides:
batch in class DataModule

getActions

public ActionList getActions()
Overrides:
getActions in class DecisionMethodsDataModule

viewMethod

public void viewMethod(boolean editable)

setRules

public void setRules(IDecisionMethod rules)
Overrides:
setRules in class DecisionMethodsDataModule

showMetabolites

public java.lang.String showMetabolites(RuleResult ruleResult)
                                 throws java.lang.Exception
Throws:
java.lang.Exception


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