verhaar.query
Class QueryAssociationBond

java.lang.Object
  extended by org.openscience.cdk.ChemObject
      extended by org.openscience.cdk.ElectronContainer
          extended by org.openscience.cdk.Bond
              extended by verhaar.query.QueryAssociationBond
All Implemented Interfaces:
java.io.Serializable, java.lang.Cloneable, org.openscience.cdk.interfaces.IBond, org.openscience.cdk.interfaces.ICDKObject, org.openscience.cdk.interfaces.IChemObject, org.openscience.cdk.interfaces.IElectronContainer, org.openscience.cdk.isomorphism.matchers.IQueryBond

public class QueryAssociationBond
extends org.openscience.cdk.Bond
implements org.openscience.cdk.isomorphism.matchers.IQueryBond

Used to query for ionic (association ) bond. Verifies if a bond is an instance of MyAssociationBond. Should be modified to use Association once org.openscience.cdk.isomorphism.matchers.QueryBond#matches(org.openscience.cdk.interfaces.Bond) method accepts ElectronContainer instead of org.openscience.cdk.interfaces.Bond. Implements org.openscience.cdk.isomorphism.matchers.QueryBond.

Author:
Nina Jeliazkova Modified 2005-10-30
See Also:
Serialized Form

Nested Class Summary
 
Nested classes/interfaces inherited from interface org.openscience.cdk.interfaces.IBond
org.openscience.cdk.interfaces.IBond.Order, org.openscience.cdk.interfaces.IBond.Stereo
 
Field Summary
 
Fields inherited from class org.openscience.cdk.Bond
atomCount, atoms, order, stereo
 
Fields inherited from class org.openscience.cdk.ElectronContainer
electronCount
 
Constructor Summary
QueryAssociationBond()
           
QueryAssociationBond(org.openscience.cdk.Atom arg0, org.openscience.cdk.Atom arg1)
           
QueryAssociationBond(org.openscience.cdk.Atom arg0, org.openscience.cdk.Atom arg1, org.openscience.cdk.interfaces.IBond.Order arg2)
           
QueryAssociationBond(org.openscience.cdk.Atom arg0, org.openscience.cdk.Atom arg1, org.openscience.cdk.interfaces.IBond.Order arg2, org.openscience.cdk.interfaces.IBond.Stereo arg3)
           
 
Method Summary
 boolean matches(org.openscience.cdk.interfaces.IBond arg0)
           
 
Methods inherited from class org.openscience.cdk.Bond
atoms, clone, compare, contains, get2DCenter, get3DCenter, getAtom, getAtomCount, getConnectedAtom, getConnectedAtoms, getOrder, getStereo, isConnectedTo, setAtom, setAtoms, setOrder, setStereo, toString
 
Methods inherited from class org.openscience.cdk.ElectronContainer
getElectronCount, setElectronCount
 
Methods inherited from class org.openscience.cdk.ChemObject
addListener, getBuilder, getFlag, getFlags, getID, getListenerCount, getNotification, getProperties, getProperty, notifyChanged, notifyChanged, removeListener, removeProperty, setFlag, setFlags, setID, setNotification, setProperties, setProperty, shallowCopy
 
Methods inherited from class java.lang.Object
equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait
 
Methods inherited from interface org.openscience.cdk.interfaces.IElectronContainer
getElectronCount, setElectronCount
 
Methods inherited from interface org.openscience.cdk.interfaces.IChemObject
addListener, getFlag, getFlags, getID, getListenerCount, getNotification, getProperties, getProperty, notifyChanged, notifyChanged, removeListener, removeProperty, setFlag, setFlags, setID, setNotification, setProperties, setProperty
 
Methods inherited from interface org.openscience.cdk.interfaces.ICDKObject
getBuilder
 

Constructor Detail

QueryAssociationBond

public QueryAssociationBond()

QueryAssociationBond

public QueryAssociationBond(org.openscience.cdk.Atom arg0,
                            org.openscience.cdk.Atom arg1)
Parameters:
arg0 -
arg1 -

QueryAssociationBond

public QueryAssociationBond(org.openscience.cdk.Atom arg0,
                            org.openscience.cdk.Atom arg1,
                            org.openscience.cdk.interfaces.IBond.Order arg2)
Parameters:
arg0 -
arg1 -
arg2 -

QueryAssociationBond

public QueryAssociationBond(org.openscience.cdk.Atom arg0,
                            org.openscience.cdk.Atom arg1,
                            org.openscience.cdk.interfaces.IBond.Order arg2,
                            org.openscience.cdk.interfaces.IBond.Stereo arg3)
Parameters:
arg0 -
arg1 -
arg2 -
arg3 -
Method Detail

matches

public boolean matches(org.openscience.cdk.interfaces.IBond arg0)
Specified by:
matches in interface org.openscience.cdk.isomorphism.matchers.IQueryBond


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